Banner

Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs34953001 chr14:74431563 A/AT LIN52 chr14:74551499-74667938:+ 0.57 6.01 1.82E-7 Box Plot
ACC rs34959201 chr20:44417938 G/A WFDC3 chr20:44376583-44420571:- 0.88 6.19 9.67E-8 Box Plot
ACC rs34962665 chr5:96288506 TAG/T ERAP2 chr5:96211643-96255420:+ 0.94 11.24 1.6E-15 Box Plot
ACC rs34964645 chr20:44384088 CA/C WFDC3 chr20:44376583-44420571:- 0.8 5.15 4.09E-6 Box Plot
ACC rs34977452 chr5:96287500 CA/C ERAP2 chr5:96211643-96255420:+ 0.82 8.52 1.97E-11 Box Plot
ACC rs35001236 chr17:62985398 A/G AMZ2P1 chr17:62962668-62971694:- 0.9 5.57 9.2E-7 Box Plot
ACC rs35009905 chr20:44374505 TC/T WFDC3 chr20:44376583-44420571:- 0.9 6.65 1.81E-8 Box Plot
ACC rs35011716 chr17:62983526 C/A AMZ2P1 chr17:62962668-62971694:- 0.9 5.57 9.2E-7 Box Plot
ACC rs35014595 chr17:41339697 T/C NBR2 chr17:41277627-41305688:+ 0.82 6.35 5.44E-8 Box Plot
ACC rs35020254 chr17:62973790 C/T AMZ2P1 chr17:62962668-62971694:- 1.03 5.05 5.82E-6 Box Plot
ACC rs35029472 chr7:76056562 A/G UPK3B chr7:76139745-76145838:+ 0.78 7.23 2.1E-9 Box Plot
ACC rs35070007 chr17:41316747 C/G NBR2 chr17:41277627-41305688:+ 0.91 7.37 1.27E-9 Box Plot
ACC rs35079894 chr7:64410459 T/G INTS4L1 chr7:64601603-64694600:+ 0.71 5.22 3.18E-6 Box Plot
ACC rs35093417 chr17:62987708 G/C AMZ2P1 chr17:62962668-62971694:- 0.9 5.57 9.2E-7 Box Plot
ACC rs35103568 chr7:97406488 GAA/G TECPR1 chr7:97843936-97881563:- 0.83 5.45 1.38E-6 Box Plot